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F9 coagulation factor IX [ Mus pahari (shrew mouse) ]

Gene ID: 110314135, updated on 15-Mar-2024

Summary

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Gene symbol
F9
Gene description
coagulation factor IX
See related
Ensembl:MGP_PahariEiJ_G0031647
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) X NC_034613.1 (50674093..50708490)

Chromosome X - NC_034613.1Genomic Context describing neighboring genes Neighboring gene malectin pseudogene Neighboring gene synaptophysin-like protein 1 Neighboring gene MCF.2 cell line derived transforming sequence Neighboring gene U6 spliceosomal RNA Neighboring gene ATPase phospholipid transporting 11C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034613.1 Chromosome X Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zymogen activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coagulation factor IX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034613.1 Reference PAHARI_EIJ_v1.1

    Range
    50674093..50708490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021188599.2 → XP_021044258.1  coagulation factor IX

    Related
    MGP_PahariEiJ_P0089172, MGP_PahariEiJ_T0089172.1
    Conserved Domains (4) summary
    smart00069
    Location:21 → 85
    GLA; Domain containing Gla (gamma-carboxyglutamate) residues
    cd00054
    Location:86 → 122
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00190
    Location:230 → 460
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam14670
    Location:127 → 163
    FXa_inhibition; Coagulation Factor Xa inhibitory site
Nucleotide Protein
Heading Accession and Version

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