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si:ch211-171b20.3 ribosomal protein L7 [ Monopterus albus (swamp eel) ]

Gene ID: 109960099, updated on 14-Mar-2024

Summary

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Gene symbol
si:ch211-171b20.3
Gene description
ribosomal protein L7
See related
Ensembl:ENSMALG00000001464
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Also known as
rpl7
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127924.1 (1409651..1417669, complement)

NW_018127924.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily B member 2b Neighboring gene somatomedin B and thrombospondin type 1 domain containing Neighboring gene retinol dehydrogenase 10a Neighboring gene staufen double-stranded RNA binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018127924.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127924.1 Reference M_albus_1.0 Primary Assembly

    Range
    1409651..1417669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020599967.1 → XP_020455623.1  60S ribosomal protein L7 isoform X3

  2. XM_020599965.1 → XP_020455621.1  60S ribosomal protein L7 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3IDC6, A0A3Q3INI7
    Related
    ENSMALP00000001948.1, ENSMALT00000002002.1
    Conserved Domains (1) summary
    TIGR01310
    Location:13 → 245
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

  3. XM_020599966.1 → XP_020455622.1  60S ribosomal protein L7 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3INI7
    Related
    ENSMALP00000001961.1, ENSMALT00000002015.1
    Conserved Domains (1) summary
    TIGR01310
    Location:2 → 221
    uL30_euk; 60S ribosomal protein uL30, eukaryotic form

RNA

  1. XR_002274942.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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