U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO3978 oxidoreductase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1099414, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

Go to the top of the page Help
Gene symbol
SCO3978
Gene description
oxidoreductase
Locus tag
SCO3978
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCBAC25E3.15c
NEW
Try the new Gene table
Try the new Transcript table

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Miscellaneous features

  • Loc: c4381547-4381482 PS01162 Quinone oxidoreductase / zeta-crystallin signature
  • Loc: c4381919-4381068 Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases, score 149.90, E-value 4.5e-41

General protein information

Go to the top of the page Help
Names
oxidoreductase
NP_628161.1
  • SCBAC25E3.15c, possible oxidoreductase, len: 294aa: similar to many eg. TR:Q53929 (EMBL:X62373) ORF 4 from the actinorhodin biosynthetic gene cluster of Streptomyces coelicolor (306 aa) fasta scores; opt: 624, Z-score: 633.9, 40.199% identity (41.581% ungapped) in 301 aa overlap. Contains Pfam match to entry PF00107 adh_zinc, Zinc-binding dehydrogenases and Prosite match to PS01162 Quinone oxidoreductase / zeta-crystallin signature.

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    4381065..4381949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_628161.1 oxidoreductase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases