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LOC109884694 FAD synthase [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 109884694, updated on 14-Dec-2023

Summary

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Gene symbol
LOC109884694
Gene description
FAD synthase
See related
Ensembl:ENSOKIG00005013111
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC109884694 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
11
Annotation release Status Assembly LG Location
101 current Okis_V2 (GCF_002021735.2) LG2 NC_034175.2 (2320923..2332622)
100 previous assembly Okis_V1 (GCF_002021735.1) Unplaced Scaffold NW_018092309.1 (69579..80222, complement)

Linkage Group LG2 - NC_034175.2Genomic Context describing neighboring genes Neighboring gene lens epithelial cell protein LEP503-like Neighboring gene SHC-transforming protein 1-like Neighboring gene uncharacterized LOC109885519 Neighboring gene transfer RNA glycine (anticodon CCC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication. Kim JH, et al. Mar Genomics, 2016 Feb. PMID 26614614

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN adenylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in FAD biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FAD synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NC_034175.2 Reference Okis_V2 Primary Assembly

    Range
    2320923..2332622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020476627.2 → XP_020332216.2  FAD synthase

    UniProtKB/TrEMBL
    A0A8C7K754
    Conserved Domains (2) summary
    cd00885
    Location:48 → 215
    cinA; Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of ...
    cd01713
    Location:339 → 489
    PAPS_reductase; This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly ...

  2. XM_031837344.1 → XP_031693204.1  FAD synthase

    UniProtKB/TrEMBL
    A0A8C7K754
    Related
    ENSOKIP00005030843.1, ENSOKIT00005032589.1
    Conserved Domains (2) summary
    cd00885
    Location:48 → 215
    cinA; Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of ...
    cd01713
    Location:339 → 489
    PAPS_reductase; This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly ...

  3. XM_031837351.1 → XP_031693211.1  FAD synthase

    UniProtKB/TrEMBL
    A0A8C7K754
    Conserved Domains (2) summary
    cd00885
    Location:48 → 215
    cinA; Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of ...
    cd01713
    Location:339 → 489
    PAPS_reductase; This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly ...
Nucleotide Protein
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