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LOC109828938 lipid phosphate phosphatase epsilon 2, chloroplastic-like [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109828938, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109828938
Gene description
lipid phosphate phosphatase epsilon 2, chloroplastic-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 1 NC_033794.1 (109768145..109781372, complement)

Chromosome 1 - NC_033794.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109839195 Neighboring gene glucose-1-phosphate adenylyltransferase large subunit 1-like Neighboring gene abscisic acid 8'-hydroxylase 2 Neighboring gene uncharacterized LOC109839203

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033794.1 Chromosome 1 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyldiphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipid phosphate phosphatase epsilon 2, chloroplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033794.1 Reference Aspof.V1

    Range
    109768145..109781372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020395935.1 → XP_020251524.1  lipid phosphate phosphatase epsilon 2, chloroplastic-like isoform X1

    Conserved Domains (1) summary
    cl00474
    Location:100 → 233
    PAP2_like; PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid ...

  2. XM_020395936.1 → XP_020251525.1  lipid phosphate phosphatase epsilon 2, chloroplastic-like isoform X2

    Conserved Domains (1) summary
    cl00474
    Location:100 → 190
    PAP2_like; PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid ...
Nucleotide Protein
Heading Accession and Version

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