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LOC109813721 glycerol-3-phosphate dehydrogenase SDP6, mitochondrial [ Cajanus cajan (pigeon pea) ]

Gene ID: 109813721, updated on 11-Apr-2024

Summary

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Gene symbol
LOC109813721
Gene description
glycerol-3-phosphate dehydrogenase SDP6, mitochondrial
Locus tag
KK1_029330
Gene type
protein coding
RefSeq status
MODEL
Organism
Cajanus cajan
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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Genomic context

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See LOC109813721 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current C.cajan_V1.0 (GCF_000340665.1) Unplaced Scaffold NW_017984136.1 (153239..167545, complement)

NW_017984136.1Genomic Context describing neighboring genes Neighboring gene pyruvate kinase 1, cytosolic Neighboring gene ATP-dependent RNA helicase DBP3 Neighboring gene beta-conglycinin beta subunit 1 Neighboring gene uncharacterized LOC109813731

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017984136 Unplaced Scaffold Reference C.cajan_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase SDP6, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.cajan_V1.0 Primary Assembly

Genomic

  1. NW_017984136.1 Reference C.cajan_V1.0 Primary Assembly

    Range
    153239..167545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020377963.2 → XP_020233552.1  glycerol-3-phosphate dehydrogenase SDP6, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A151S2C5
    Conserved Domains (1) summary
    PLN02464
    Location:1 → 629
    PLN02464; glycerol-3-phosphate dehydrogenase

  2. XM_020377964.2 → XP_020233553.1  glycerol-3-phosphate dehydrogenase SDP6, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A151S2C5
    Conserved Domains (1) summary
    PLN02464
    Location:1 → 629
    PLN02464; glycerol-3-phosphate dehydrogenase

  3. XM_020377962.2 → XP_020233551.1  glycerol-3-phosphate dehydrogenase SDP6, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A151S2C5
    Conserved Domains (1) summary
    PLN02464
    Location:1 → 629
    PLN02464; glycerol-3-phosphate dehydrogenase

  4. XM_020377965.2 → XP_020233554.1  glycerol-3-phosphate dehydrogenase SDP6, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A151S2C5
    Conserved Domains (1) summary
    PLN02464
    Location:1 → 629
    PLN02464; glycerol-3-phosphate dehydrogenase
Nucleotide Protein
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