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LOC109750402 peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [ Aegilops tauschii ]

Gene ID: 109750402, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109750402
Gene description
peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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Location:
chromosome: 3D
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 3D NC_053037.2 (2398838..2400099, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 3D NC_053037.1 (2401840..2403099, complement)

Chromosome 3D - NC_053037.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109770096 Neighboring gene small nucleolar RNA Z247 Neighboring gene protein decapping 5 Neighboring gene uncharacterized LOC109777874

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053037.2 Reference Aet v5.0 Primary Assembly

    Range
    2398838..2400099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020309359.3 → XP_020164948.1  peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic

    UniProtKB/TrEMBL
    A0A453DNP8
    Conserved Domains (1) summary
    cl00197
    Location:82 → 250
    cyclophilin; cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug ...
Nucleotide Protein
Heading Accession and Version

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