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POC1B-AS1 POC1B antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 109729146, updated on 17-Jun-2024

Summary

Official Symbol
POC1B-AS1provided by HGNC
Official Full Name
POC1B antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:52949
See related
AllianceGenome:HGNC:52949
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See POC1B-AS1 in Genome Data Viewer
Location:
12q21.33
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (89525570..89541542)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (89507426..89523356)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (89919347..89935319)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene POC1 centriolar protein B Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:89897120-89897793 Neighboring gene POC1B-GALNT4 readthrough Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6707 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4693 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4694 Neighboring gene centromere protein C pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4695 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 4 Neighboring gene ATPase plasma membrane Ca2+ transporting 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6708 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6709 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6710 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4696 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4697 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4698 Neighboring gene uncharacterized LOC107984543 Neighboring gene ATP2B1 antisense RNA 1 Neighboring gene RNA, 5S ribosomal pseudogene 365

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146294.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC025034

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    89525570..89541542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    89507426..89523356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)