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SCO1390 PTS system sugar phosphotransferase component IIA [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096816, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO1390
Gene description
PTS system sugar phosphotransferase component IIA
Locus tag
SCO1390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC1A8A.10
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 1474348-1474653 Pfam match to entry PF00358 PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1, score 90.30, E-value 2e-24
  • Loc: 1474612-1474635 PS00017 ATP/GTP-binding site motif A (P-loop)

General protein information

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Names
PTS system sugar phosphotransferase component IIA
NP_625673.1
  • SC1A8A.10, possible PTS system sugar phosphotransferase component IIA, len: 176a; similar to many e.g. TR:BAA82669 (EMBL:AB030569) phosphoenolpyruvate:carbohydrate phosphotransferase system family from Streptomyces griseus (149 aa) fasta scores; opt: 897, z-score: 951.7, E(): 0, 88.6% identity in 149 aa overlap and SW:P42015 (PTGA_BACST) PTS system, glucose-specific IIABC component from Bacillus stearothermophilus (324 aa) fasta scores; opt: 359, z-score: 386.4, E(): 4.3e-14, 40.6% identity in 143 aa overlap. Contains Pfam match to entry PF00358 PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1474291..1474740
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625673.1 PTS system sugar phosphotransferase component IIA [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Molecular Biology Databases