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cpt1ab carnitine palmitoyltransferase 1Ab (liver) [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109638956, updated on 14-Mar-2024

Summary

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Gene symbol
cpt1ab
Gene description
carnitine palmitoyltransferase 1Ab (liver)
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017859687.1 (910741..929780, complement)

NW_017859687.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L23 Neighboring gene SITS-binding protein-like Neighboring gene USP6 N-terminal-like protein Neighboring gene UEV and lactate/malate dehyrogenase domains

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017859687.1 Unplaced Scaffold Reference Flounder_ref_guided_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, liver isoform-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paralichthys olivaceus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Flounder_ref_guided_V1.0 Primary Assembly

Genomic

  1. NW_017859687.1 Reference Flounder_ref_guided_V1.0 Primary Assembly

    Range
    910741..929780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020102162.1 → XP_019957721.1  carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1

    Conserved Domains (2) summary
    pfam00755
    Location:172 → 758
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  2. XM_020102161.1 → XP_019957720.1  carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1

    Conserved Domains (2) summary
    pfam00755
    Location:172 → 758
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  3. XM_020102163.1 → XP_019957722.1  carnitine O-palmitoyltransferase 1, liver isoform-like isoform X2

    Conserved Domains (2) summary
    pfam00755
    Location:172 → 757
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus
Nucleotide Protein
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