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FXN frataxin [ Bos indicus (zebu cattle) ]

Gene ID: 109562939, updated on 14-Mar-2024

Summary

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Gene symbol
FXN
Gene description
frataxin
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See FXN in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 8 NC_032657.1 (47538449..47560736)

Chromosome 8 - NC_032657.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta Neighboring gene PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 Neighboring gene uncharacterized LOC109562937 Neighboring gene uncharacterized LOC109562938 Neighboring gene tight junction protein 2 Neighboring gene endosomal transmembrane epsin interactor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032657.1 Chromosome 8 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron incorporation into metallo-sulfur cluster IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
frataxin, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032657.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    47538449..47560736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019966042.1 → XP_019821601.1  frataxin, mitochondrial

    UniProtKB/TrEMBL
    A0A6P5C7H1
    Conserved Domains (1) summary
    TIGR03422
    Location:95 → 192
    mito_frataxin; frataxin
Nucleotide Protein
Heading Accession and Version

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