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LOC109489879 glycoprotein Xg-like [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 109489879, updated on 16-Nov-2023

Summary

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Gene symbol
LOC109489879
Gene description
glycoprotein Xg-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
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Genomic context

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See LOC109489879 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (1599328..1615173)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217739.1 (611327..623450, complement)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117797480 Neighboring gene CD99 molecule (Xg blood group) Neighboring gene Xg glycoprotein (Xg blood group) Neighboring gene uncharacterized LOC117797423 Neighboring gene glycogenin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in T cell extravasation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homotypic cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neutrophil extravasation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein Xg-like; uncharacterized protein LOC109489879

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    1599328..1615173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034649554.1 → XP_034505445.1  glycoprotein Xg-like isoform X4

  2. XM_034649551.1 → XP_034505442.1  uncharacterized protein LOC109489879 isoform X1

  3. XM_034649553.1 → XP_034505444.1  glycoprotein Xg-like isoform X3

  4. XM_034649552.1 → XP_034505443.1  uncharacterized protein LOC109489879 isoform X2

Nucleotide Protein
Heading Accession and Version

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