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LOC109356423 polygalacturonase-like [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109356423, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109356423
Gene description
polygalacturonase-like
Locus tag
TanjilG_14770
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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Location:
chromosome: LG09
Exon count:
9
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG09 NC_032017.1 (5070923..5075144, complement)

Chromosome LG09 - NC_032017.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109357383 Neighboring gene uncharacterized LOC109356167 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene zinc finger CCCH domain-containing protein 30-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032017.1 Chromosome LG09 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anther dehiscence IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fruit dehiscence IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032017.1 Reference LupAngTanjil_v1.0

    Range
    5070923..5075144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019599746.1 → XP_019455291.1  polygalacturonase-like

    UniProtKB/TrEMBL
    A0A1J7HS40
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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