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LOC109333147 putative casein kinase II subunit beta-4 [ Lupinus angustifolius (narrow-leaved blue lupine) ]

Gene ID: 109333147, updated on 1-Feb-2024

Summary

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Gene symbol
LOC109333147
Gene description
putative casein kinase II subunit beta-4
Locus tag
TanjilG_00931
Gene type
protein coding
RefSeq status
MODEL
Organism
Lupinus angustifolius
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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Genomic context

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Location:
chromosome: LG18
Exon count:
5
Annotation release Status Assembly Chr Location
100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG18 NC_032026.1 (14520271..14522521)

Chromosome LG18 - NC_032026.1Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like Neighboring gene expansin-like B1 Neighboring gene calcineurin B-like protein 1 Neighboring gene casein kinase II subunit beta-2-like Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032026.1 Chromosome LG18 Reference LupAngTanjil_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein kinase CK2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative casein kinase II subunit beta-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LupAngTanjil_v1.0

Genomic

  1. NC_032026.1 Reference LupAngTanjil_v1.0

    Range
    14520271..14522521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019568460.1 → XP_019424005.1  putative casein kinase II subunit beta-4 isoform X1

    UniProtKB/TrEMBL
    A0A4P1QQV2

  2. XM_019568461.1 → XP_019424006.1  putative casein kinase II subunit beta-4 isoform X2

    UniProtKB/TrEMBL
    A0A4P1QQV2

  3. XM_019568463.1 → XP_019424008.1  putative casein kinase II subunit beta-4 isoform X4

    UniProtKB/TrEMBL
    A0A4P1QQV2

  4. XM_019568462.1 → XP_019424007.1  putative casein kinase II subunit beta-4 isoform X3

    UniProtKB/TrEMBL
    A0A4P1QQV2
Nucleotide Protein
Heading Accession and Version

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