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LOC109239392 beta-hexosaminidase 3 [ Nicotiana attenuata ]

Gene ID: 109239392, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109239392
Gene description
beta-hexosaminidase 3
Locus tag
A4A49_27115
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana attenuata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
HEXO3
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current NIATTr2 (GCF_001879085.1) Unplaced Scaffold NW_017670437.1 (112970..121655, complement)

NW_017670437.1Genomic Context describing neighboring genes Neighboring gene LOB domain-containing protein 6 Neighboring gene endoglucanase 12 Neighboring gene glutathione S-transferase U7-like Neighboring gene type II inositol polyphosphate 5-phosphatase 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017670437.1 Unplaced Scaffold Reference NIATTr2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution and diversification of the Argonaute family of proteins in plants. Singh RK, et al. BMC Plant Biol, 2015 Jan 28. PMID 25626325, Free PMC Article
  2. Cytokinin levels and signaling respond to wounding and the perception of herbivore elicitors in Nicotiana attenuata. Schäfer M, et al. J Integr Plant Biol, 2015 Feb. PMID 24924599, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana attenuata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NIATTr2

Genomic

  1. NW_017670437.1 Reference NIATTr2

    Range
    112970..121655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019405948.1 → XP_019261493.1  beta-hexosaminidase 3 isoform X2

    UniProtKB/TrEMBL
    A0A314L9I0

  2. XM_019405946.1 → XP_019261491.1  beta-hexosaminidase 3 isoform X2

    UniProtKB/TrEMBL
    A0A314L9I0

  3. XM_019405949.1 → XP_019261494.1  beta-hexosaminidase 3 isoform X2

    UniProtKB/TrEMBL
    A0A314L9I0

  4. XM_019405945.1 → XP_019261490.1  beta-hexosaminidase 3 isoform X2

    UniProtKB/TrEMBL
    A0A314L9I0

  5. XM_019405944.1 → XP_019261489.1  beta-hexosaminidase 3 isoform X1

  6. XM_019405947.1 → XP_019261492.1  beta-hexosaminidase 3 isoform X2

    UniProtKB/TrEMBL
    A0A314L9I0
Nucleotide Protein
Heading Accession and Version

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