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LOC109087372 CTD nuclear envelope phosphatase 1A-like [ Cyprinus carpio (common carp) ]

Gene ID: 109087372, updated on 7-Dec-2023

Summary

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Gene symbol
LOC109087372
Gene description
CTD nuclear envelope phosphatase 1A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

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Location:
chromosome: B7
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B7 NC_056603.1 (40908656..40919819)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017545324.1 (241809..265885)

Chromosome B7 - NC_056603.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 1 subunit gamma 1 Neighboring gene zinc finger protein 821-like Neighboring gene ataxin 1-like Neighboring gene gamma-aminobutyric acid receptor-associated protein Neighboring gene spermatogenesis associated 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CTD nuclear envelope phosphatase 1A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056603.1 Reference ASM1834038v1 Primary Assembly

    Range
    40908656..40919819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042728676.1 → XP_042584610.1  CTD nuclear envelope phosphatase 1A-like

    UniProtKB/TrEMBL
    A0A8C1RL30, A0A8C2BJX5, A0A8C2KFJ5
    Conserved Domains (1) summary
    TIGR02251
    Location:65 → 233
    HIF-SF_euk; Dullard-like phosphatase domain
Nucleotide Protein
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