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LOC109083633 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [ Cyprinus carpio (common carp) ]

Gene ID: 109083633, updated on 7-Dec-2023

Summary

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Gene symbol
LOC109083633
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Also known as
tab1
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Genomic context

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Location:
chromosome: A6
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A6 NC_056577.1 (5465875..5474587)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017543208.1 (12784..15710, complement)

Chromosome A6 - NC_056577.1Genomic Context describing neighboring genes Neighboring gene voltage-dependent calcium channel gamma-2 subunit Neighboring gene synaptogyrin-1-like Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like Neighboring gene C1q and TNF related 6b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1
Names
TAK1-binding protein 1
TGF-beta activated kinase 1/MAP3K7 binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056577.1 Reference ASM1834038v1 Primary Assembly

    Range
    5465875..5474587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042757605.1 → XP_042613539.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

    UniProtKB/TrEMBL
    A0A8C1URS4, A0A9R0AW51
    Conserved Domains (1) summary
    cd00143
    Location:34 → 335
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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