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LOC109019134 endochitinase 2-like [ Juglans regia (English walnut) ]

Gene ID: 109019134, updated on 22-Oct-2023

Summary

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Gene symbol
LOC109019134
Gene description
endochitinase 2-like
Locus tag
F2P56_029566
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC109019134 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 13 NC_049913.1 (7178378..7179960)
100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017436397.1 (3114..4636, complement)

Chromosome 13 - NC_049913.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109019131 Neighboring gene uncharacterized LOC109019130 Neighboring gene uncharacterized LOC109012145 Neighboring gene NAC domain-containing protein 22-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall macromolecule catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to fungus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endochitinase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049913.1 Reference Walnut 2.0 Primary Assembly

    Range
    7178378..7179960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019001361.2 → XP_018856906.1  endochitinase 2-like

    UniProtKB/TrEMBL
    A0A2I4HL67
    Conserved Domains (2) summary
    pfam00182
    Location:73 → 303
    Glyco_hydro_19; Chitinase class I
    pfam00187
    Location:23 → 54
    Chitin_bind_1; Chitin recognition protein
Nucleotide Protein
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