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LOC108935122 ribonucleoprotein PTB-binding 2-like [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108935122, updated on 22-Oct-2023

Summary

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Gene symbol
LOC108935122
Gene description
ribonucleoprotein PTB-binding 2-like
See related
Ensembl:ENSSFOG00015013015
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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Genomic context

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Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 3 NC_041808.1 (16931264..16955336)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371874.1 (5631642..5653165, complement)

Chromosome 3 - NC_041808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108934920 Neighboring gene VWFA and cache domain-containing protein 1-like Neighboring gene tyrosine-protein kinase JAK1-like Neighboring gene putative tyrosine-protein phosphatase auxilin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonucleoprotein PTB-binding 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041808.1 Reference fSclFor1.1 Primary Assembly

    Range
    16931264..16955336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029250306.1 → XP_029106139.1  ribonucleoprotein PTB-binding 2-like isoform X2

    UniProtKB/TrEMBL
    A0A0P7VRP3
    Conserved Domains (2) summary
    pfam03154
    Location:470 → 597
    Atrophin-1; Atrophin-1 family
    cl17169
    Location:232 → 328
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_029250305.1 → XP_029106138.1  ribonucleoprotein PTB-binding 2-like isoform X1

    UniProtKB/TrEMBL
    A0A0P7VRP3, A0A8C9RU04
    Related
    ENSSFOP00015020228.2, ENSSFOT00015020460.2
    Conserved Domains (2) summary
    pfam03154
    Location:482 → 609
    Atrophin-1; Atrophin-1 family
    cl17169
    Location:232 → 328
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_029250307.1 → XP_029106140.1  ribonucleoprotein PTB-binding 2-like isoform X3

    UniProtKB/TrEMBL
    A0A0P7VRP3
    Conserved Domains (2) summary
    pfam03154
    Location:404 → 531
    Atrophin-1; Atrophin-1 family
    cl17169
    Location:154 → 250
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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