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eef1d eukaryotic translation elongation factor 1 delta [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108930975, updated on 22-Oct-2023

Summary

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Gene symbol
eef1d
Gene description
eukaryotic translation elongation factor 1 delta
See related
Ensembl:ENSSFOG00015006740
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 1 NC_041806.1 (25394354..25407164)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371668.1 (89308..102112, complement)

Chromosome 1 - NC_041806.1Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 39-like Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene protein THEM6-like Neighboring gene protein THEM6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation elongation factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041806.1 Reference fSclFor1.1 Primary Assembly

    Range
    25394354..25407164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018746493.2 → XP_018602009.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A8C9RAH8

  2. XM_018746497.2 → XP_018602013.1  elongation factor 1-delta isoform X7

    UniProtKB/TrEMBL
    A0A8C9RAH8

  3. XM_018746490.2 → XP_018602006.2  elongation factor 1-delta isoform X2

    UniProtKB/TrEMBL
    A0A0P7VD58, A0A8C9RCV8
    Related
    ENSSFOP00015010390.2, ENSSFOT00015010531.2
    Conserved Domains (2) summary
    pfam10587
    Location:502 → 526
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    pfam00736
    Location:538 → 621
    EF1_GNE; EF-1 guanine nucleotide exchange domain

  4. XM_018746489.2 → XP_018602005.2  elongation factor 1-delta isoform X1

    UniProtKB/TrEMBL
    A0A0P7VD58
    Conserved Domains (2) summary
    pfam10587
    Location:531 → 555
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    pfam00736
    Location:567 → 650
    EF1_GNE; EF-1 guanine nucleotide exchange domain

  5. XM_018746494.2 → XP_018602010.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A8C9RAH8

  6. XM_018746495.2 → XP_018602011.1  elongation factor 1-delta isoform X6

    UniProtKB/TrEMBL
    A0A8C9RAH8
    Related
    ENSSFOP00015010373.1, ENSSFOT00015010514.2

  7. XM_018746491.2 → XP_018602007.2  elongation factor 1-delta isoform X3

    UniProtKB/TrEMBL
    A0A0P7VD58, A0A8C9R7V1
    Related
    ENSSFOP00015010441.2, ENSSFOT00015010583.2
    Conserved Domains (3) summary
    pfam10587
    Location:481 → 505
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    pfam15799
    Location:359 → 444
    CCD48; Coiled-coil domain-containing protein 48
    pfam00736
    Location:517 → 600
    EF1_GNE; EF-1 guanine nucleotide exchange domain

  8. XM_018746492.2 → XP_018602008.2  elongation factor 1-delta isoform X4

    UniProtKB/TrEMBL
    A0A0P7VD58
    Conserved Domains (3) summary
    pfam10587
    Location:457 → 481
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    pfam15799
    Location:367 → 420
    CCD48; Coiled-coil domain-containing protein 48
    pfam00736
    Location:493 → 576
    EF1_GNE; EF-1 guanine nucleotide exchange domain
Nucleotide Protein
Heading Accession and Version

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