U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108898544 forkhead box protein O3-like [ Lates calcarifer (barramundi perch) ]

Gene ID: 108898544, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LOC108898544
Gene description
forkhead box protein O3-like
See related
EnsemblRapid:ENSLCAG00010011337
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC108898544 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
2
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG15 NC_066847.1 (8299629..8328712)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017363839.1 (497135..531253, complement)

Linkage Group LG15 - NC_066847.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 4B1 Neighboring gene uncharacterized LOC108898564 Neighboring gene protein phosphatase 1, regulatory subunit 8b Neighboring gene mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) Neighboring gene Scm polycomb group protein homolog 1 Neighboring gene uncharacterized LOC108898539 Neighboring gene Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b Neighboring gene CTP synthase 1b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
forkhead box protein O3-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066847.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    8299629..8328712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051075777.1 → XP_050931734.1  forkhead box protein O3-like

    UniProtKB/TrEMBL
    A0A4W6DGW4
    Related
    ENSLCAP00010024182.1, ENSLCAT00010024713.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases