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C1QL1 complement C1q like 1 [ Homo sapiens (human) ]

Gene ID: 10882, updated on 13-Mar-2020

Summary

Official Symbol
C1QL1provided by HGNC
Official Full Name
complement C1q like 1provided by HGNC
Primary source
HGNC:HGNC:24182
See related
Ensembl:ENSG00000131094 MIM:611586
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CRF; C1QRF; CTRP14; C1QTNF14
Expression
Biased expression in brain (RPKM 10.8), kidney (RPKM 1.7) and 4 other tissues See more
Orthologs

Genomic context

See C1QL1 in Genome Data Viewer
Location:
17q21.31
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (44959693..44968303, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (43037061..43045644, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371793 Neighboring gene kinesin family member 18B Neighboring gene microRNA 6783 Neighboring gene basic proline-rich protein-like Neighboring gene uncharacterized LOC107987243

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
GWAS of DNA methylation variation within imprinting control regions suggests parent-of-origin association.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
locomotory behavior NAS
Non-traceable Author Statement
more info
PubMed 
maintenance of synapse structure IEA
Inferred from Electronic Annotation
more info
 
motor learning IEA
Inferred from Electronic Annotation
more info
 
neuron remodeling IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
climbing fiber IEA
Inferred from Electronic Annotation
more info
 
collagen trimer IEA
Inferred from Electronic Annotation
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
presynapse IEA
Inferred from Electronic Annotation
more info
 
synaptic cleft IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
C1q-related factor
Names
C1q and tumor necrosis factor-related protein 14
C1q/TNF-related protein 14
complement component 1, q subcomponent-like 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_006688.5NP_006679.1  C1q-related factor precursor

    See identical proteins and their annotated locations for NP_006679.1

    Status: VALIDATED

    Source sequence(s)
    AC015936, BC008798
    Consensus CDS
    CCDS11492.1
    UniProtKB/Swiss-Prot
    O75973
    Related
    ENSP00000253407.2, ENST00000253407.4
    Conserved Domains (1) summary
    pfam00386
    Location:131255
    C1q; C1q domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    44959693..44968303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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