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LOC108631862 hippocampus abundant transcript 1 protein [ Ceratina calcarata ]

Gene ID: 108631862, updated on 1-Aug-2024

Summary

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Gene symbol
LOC108631862
Gene description
hippocampus abundant transcript 1 protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratina calcarata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Ceratina; Zadontomerus
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM165200v1 (GCF_001652005.1) Unplaced Scaffold NW_017181113.1 (462283..470008, complement)

NW_017181113.1Genomic Context describing neighboring genes Neighboring gene Insulin degrading metalloproteinase Neighboring gene TBC1 domain family member 7 Neighboring gene uncharacterized LOC108631836 Neighboring gene cellular tumor antigen p53

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017181113 Unplaced Scaffold Reference ASM165200v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hippocampus abundant transcript 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratina calcarata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM165200v1

Genomic

  1. NW_017181113.1 Reference ASM165200v1

    Range
    462283..470008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018036051.2 → XP_017891540.1  hippocampus abundant transcript 1 protein isoform X2

    UniProtKB/TrEMBL
    A0AAJ7NEQ3

  2. XM_018036050.2 → XP_017891539.1  hippocampus abundant transcript 1 protein isoform X1

    UniProtKB/TrEMBL
    A0AAJ7NEP9

  3. XM_018036055.2 → XP_017891544.1  hippocampus abundant transcript 1 protein isoform X4

    UniProtKB/TrEMBL
    A0AAJ7JEF3

  4. XM_018036052.2 → XP_017891541.1  hippocampus abundant transcript 1 protein isoform X3

    UniProtKB/TrEMBL
    A0AAJ7NER1

  5. XM_026819185.1 → XP_026674986.1  hippocampus abundant transcript 1 protein isoform X5

    UniProtKB/TrEMBL
    A0AAJ7SBE4
    Conserved Domains (1) summary
    pfam07690
    Location:58 → 399
    MFS_1; Major Facilitator Superfamily

  6. XM_018036053.2 → XP_017891542.1  hippocampus abundant transcript 1 protein isoform X3

    UniProtKB/TrEMBL
    A0AAJ7NER1

  7. XM_018036054.2 → XP_017891543.1  hippocampus abundant transcript 1 protein isoform X3

    UniProtKB/TrEMBL
    A0AAJ7NER1
Nucleotide Protein
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