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prpf38a pre-mRNA processing factor 38A [ Pygocentrus nattereri (red-bellied piranha) ]

Gene ID: 108440208, updated on 14-Mar-2024

Summary

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Gene symbol
prpf38a
Gene description
pre-mRNA processing factor 38A
See related
EnsemblRapid:ENSPNAG00000010399
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygocentrus nattereri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Pygocentrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 26
Exon count:
10
Annotation release Status Assembly Chr Location
101 current fPygNat1.pri (GCF_015220715.1) 26 NC_051236.1 (22647365..22652619)
100 previous assembly Pygocentrus_nattereri-1.0.2 (GCF_001682695.1) Unplaced Scaffold NW_016243764.1 (4977746..4982770)

Chromosome 26 - NC_051236.1Genomic Context describing neighboring genes Neighboring gene MPL proto-oncogene, thrombopoietin receptor Neighboring gene origin recognition complex, subunit 1 Neighboring gene protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) Neighboring gene tetraspanin-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor 38A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygocentrus nattereri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPygNat1.pri

Genomic

  1. NC_051236.1 Reference fPygNat1.pri

    Range
    22647365..22652619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017718977.2 → XP_017574466.1  pre-mRNA-splicing factor 38A

    UniProtKB/TrEMBL
    A0A3B4DQY5
    Related
    ENSPNAP00000025369.1, ENSPNAT00000007799.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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