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LOC108344700 GDSL esterase/lipase At3g27950 [ Vigna angularis (adzuki bean) ]

Gene ID: 108344700, updated on 23-Nov-2023

Summary

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Gene symbol
LOC108344700
Gene description
GDSL esterase/lipase At3g27950
Locus tag
HKW66_Vig0256210
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 8 NC_068977.1 (800161..803091, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 10 NC_030646.1 (38934428..38937385)

Chromosome 8 - NC_068977.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128193620 Neighboring gene protein KINESIN LIGHT CHAIN-RELATED 2 Neighboring gene L-aspartate oxidase 2-a, chloroplastic Neighboring gene uncharacterized LOC108346152

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDSL esterase/lipase At3g27950

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068977.1 Reference ASM1680809v1 Primary Assembly

    Range
    800161..803091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017583154.2 → XP_017438643.1  GDSL esterase/lipase At3g27950

    UniProtKB/TrEMBL
    A0A0L9VPE7, A0A0S3T755
    Conserved Domains (1) summary
    cd01837
    Location:38 → 363
    SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
Nucleotide Protein
Heading Accession and Version

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