U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108342840 pyruvate decarboxylase 1 [ Vigna angularis (adzuki bean) ]

Gene ID: 108342840, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LOC108342840
Gene description
pyruvate decarboxylase 1
Locus tag
HKW66_Vig0066350
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 6 NC_068975.1 (34524322..34528106, complement)
100 previous assembly Vigan1.1 (GCF_001190045.1) 9 NC_030645.1 (28498488..28502286, complement)

Chromosome 6 - NC_068975.1Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At1g28570-like Neighboring gene GDSL esterase/lipase At1g28600 Neighboring gene GDSL esterase/lipase At1g28600 Neighboring gene GDSL esterase/lipase At1g28590-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carboxy-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pyruvate decarboxylase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068975.1 Reference ASM1680809v1 Primary Assembly

    Range
    34524322..34528106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052879710.1 → XP_052735670.1  pyruvate decarboxylase 1 isoform X2

  2. XM_017580692.2 → XP_017436181.1  pyruvate decarboxylase 1 isoform X1

    UniProtKB/TrEMBL
    A0A0L9VF71, A0A0S3S2Y1
    Conserved Domains (1) summary
    PLN02573
    Location:8 → 584
    PLN02573; pyruvate decarboxylase

RNA

  1. XR_008250190.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases