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il11ra interleukin 11 receptor subunit alpha [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108276979, updated on 14-Mar-2024

Summary

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Gene symbol
il11ra
Gene description
interleukin 11 receptor subunit alpha
See related
Ensembl:ENSIPUG00000024886
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 16 NC_030431.2 (20267648..20304519, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 16 NC_030431.1 (6452638..6489441)

Chromosome 16 - NC_030431.2Genomic Context describing neighboring genes Neighboring gene CY domain-containing protein Neighboring gene uncharacterized LOC108276980 Neighboring gene transmembrane protein 267 Neighboring gene ciliary neurotrophic factor receptor Neighboring gene galactose-1-phosphate uridylyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article
  2. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-11 receptor subunit alpha
Names
interleukin 11 receptor, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030431.2 Reference Coco_2.0 Primary Assembly

    Range
    20267648..20304519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017489196.3 → XP_017344685.1  interleukin-11 receptor subunit alpha isoform X3

    UniProtKB/TrEMBL
    W5UE52
    Related
    ENSIPUP00000037181.1

  2. XM_017489195.2 → XP_017344684.1  interleukin-11 receptor subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A2D0SPQ2

  3. XM_017489192.2 → XP_017344681.1  interleukin-11 receptor subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A2D0SQA5
    Related
    ENSIPUP00000037179.1
Nucleotide Protein
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Gene LinkOut

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