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cpn1 carboxypeptidase N, polypeptide 1 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108274305, updated on 14-Mar-2024

Summary

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Gene symbol
cpn1
Gene description
carboxypeptidase N, polypeptide 1
See related
Ensembl:ENSIPUG00000016730
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 13 NC_030428.2 (15337523..15343712, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 13 NC_030428.1 (13906117..13912306)

Chromosome 13 - NC_030428.2Genomic Context describing neighboring genes Neighboring gene hyaluronan-binding protein 2 Neighboring gene dynamin binding protein Neighboring gene FERM domain-containing protein 1 Neighboring gene uncharacterized LOC108273433

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase N catalytic chain
Names
Carboxypeptidase N catalytic chain
carboxypeptidase N subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030428.2 Reference Coco_2.0 Primary Assembly

    Range
    15337523..15343712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017484402.3 → XP_017339891.1  carboxypeptidase N catalytic chain

    UniProtKB/TrEMBL
    A0A2D0SBQ4, W5UDT2
    Related
    ENSIPUP00000024738.1
Nucleotide Protein
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