U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

serbp1a SERPINE1 mRNA binding protein 1a [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108271890, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
serbp1a
Gene description
SERPINE1 mRNA binding protein 1a
See related
Ensembl:ENSIPUG00000005252
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 11 NC_030426.2 (21517520..21525410, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 11 NC_030426.1 (6323752..6331642)

Chromosome 11 - NC_030426.2Genomic Context describing neighboring genes Neighboring gene interleukin 23 receptor Neighboring gene interleukin 12 receptor, beta 2a Neighboring gene uncharacterized LOC124628638 Neighboring gene hydroxysteroid (17-beta) dehydrogenase 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
SERPINE1 mRNA binding protein 1a

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030426.2 Reference Coco_2.0 Primary Assembly

    Range
    21517520..21525410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017479814.1 → XP_017335303.1  SERPINE1 mRNA binding protein 1a isoform X4

    UniProtKB/TrEMBL
    A0A2D0RXS5

  2. XM_017479812.1 → XP_017335301.1  SERPINE1 mRNA binding protein 1a isoform X2

    UniProtKB/TrEMBL
    A0A2D0RYP6
    Related
    ENSIPUP00000007614.1, ENSIPUT00000007946.1

  3. XM_017479813.1 → XP_017335302.1  SERPINE1 mRNA binding protein 1a isoform X3

    UniProtKB/TrEMBL
    A0A2D0RXS6

  4. XM_017479811.1 → XP_017335300.1  SERPINE1 mRNA binding protein 1a isoform X1

    UniProtKB/TrEMBL
    A0A2D0RZB8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases