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naf1 nuclear assembly factor 1 homolog (S. cerevisiae) [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108251622, updated on 10-Apr-2024

Summary

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Gene symbol
naf1
Gene description
nuclear assembly factor 1 homolog (S. cerevisiae)
See related
EnsemblRapid:ENSKMAG00010000283
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG6
Exon count:
9
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG6 NC_051435.1 (30537094..30551604, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016095200.1 (20064..34190, complement)

Linkage Group LG6 - NC_051435.1Genomic Context describing neighboring genes Neighboring gene histone H3.2-like Neighboring gene uncharacterized LOC108251623 Neighboring gene histone H3-like Neighboring gene uncharacterized LOC119617082 Neighboring gene vascular endothelial growth factor c

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box H/ACA snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sno(s)RNA-containing ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
H/ACA ribonucleoprotein complex non-core subunit NAF1
Names
nuclear assembly factor 1 ribonucleoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051435.1 Reference ASM164957v2 Primary Assembly

    Range
    30537094..30551604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017441974.3 → XP_017297463.1  H/ACA ribonucleoprotein complex non-core subunit NAF1

    UniProtKB/TrEMBL
    A0A3Q2ZTJ0
    Related
    ENSKMAP00010000472.1, ENSKMAT00010000550.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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