DIAPH2-AS1 DIAPH2 antisense RNA 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: DIAPH2-AS1provided by HGNC
Official Full Name: DIAPH2 antisense RNA 1provided by HGNC
Primary source: HGNC:HGNC:16972
See related: Ensembl:ENSG00000236256 MIM:300347; AllianceGenome:HGNC:16972
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: EPAG
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: Xq21.33

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2023_03	current	GRCh38.p14 (GCF_000001405.40)	X	NC_000023.11 (97528364..97564535, complement)
RS_2023_03	current	T2T-CHM13v2.0 (GCF_009914755.1)	X	NC_060947.1 (95967822..96003988, complement)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	X	NC_000023.10 (96783363..96819534, complement)

Chromosome X - NC_000023.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Two transcription factors, HOXD8 and Lhx3, predicted to regulate the expression of lncRNAs, were also selected. Using RNA interference technology, HOXD8 and Lhx3 were found to positively regulate DIAPH2-AS1 and RP11-445K13.2 in HTR-8/SVneo cells
Title: HOXD8/DIAPH2-AS1 epigenetically regulates PAX3 and impairs HTR-8/SVneo cell function under hypoxia.

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

DXS1458 (e-PCR)
- UniSTS:99159

DIAPH2__4738 (e-PCR)
- UniSTS:464475

G65253 (e-PCR)
- UniSTS:166329

G65269 (e-PCR)
- UniSTS:166330

G65270 (e-PCR)
- UniSTS:166332

G65261 (e-PCR)
- UniSTS:166333

G65258 (e-PCR)
- UniSTS:166334

G65254 (e-PCR)
- UniSTS:166335

G65272 (e-PCR)
- UniSTS:166340

Other Names

DIAPH2 antisense RNA 1 (non-protein coding)
early lymphoid activation protein

Gene Ontology Provided by GOA

Process	Evidence Code	Pubs
involved_in signal transduction	NAS Non-traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.