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LOC108206262 tubulin-folding cofactor E [ Daucus carota subsp. sativus ]

Gene ID: 108206262, updated on 2-Apr-2024

Summary

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Gene symbol
LOC108206262
Gene description
tubulin-folding cofactor E
Locus tag
DCAR_006209
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC108206262 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 2 NC_030382.2 (39030005..39035604)
100 previous assembly ASM162521v1 (GCF_001625215.1) 2 NC_030382.1 (23161080..23166654)

Chromosome 2 - NC_030382.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108207521 Neighboring gene uncharacterized LOC108206513 Neighboring gene transcription termination factor MTERF6, chloroplastic/mitochondrial Neighboring gene uncharacterized LOC135150659

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of mitotic spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear migration involved in conjugation with cellular fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-chaperonin tubulin folding pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tubulin complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell tip IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of microtubule associated complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin-folding cofactor E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030382.2 Reference DH1 v3.0 Primary Assembly

    Range
    39030005..39035604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064087434.1 → XP_063943504.1  tubulin-folding cofactor E isoform X2

  2. XM_017376507.2 → XP_017231996.1  tubulin-folding cofactor E isoform X1

    UniProtKB/TrEMBL
    A0A166DKX5
Nucleotide Protein
Heading Accession and Version

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