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LOC108180207 uncharacterized LOC108180207 [ Danio rerio (zebrafish) ]

Gene ID: 108180207, updated on 4-Nov-2022

Summary

Gene symbol
LOC108180207
Gene description
uncharacterized LOC108180207
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

Location:
chromosome: 20
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (24435671..24445225, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (24541433..24546023, complement)

Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene uncharacterized LOC103911176 Neighboring gene uncharacterized LOC108180325 Neighboring gene uncharacterized LOC108180326 Neighboring gene eph receptor A7

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC108180207

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007131.7 Reference GRCz11 Primary Assembly

    Range
    24435671..24445225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021468536.1XP_021324211.1  uncharacterized protein LOC108180207

    UniProtKB/TrEMBL
    A0A8M9PPM7
    Conserved Domains (4) summary
    pfam02414
    Location:621801
    Borrelia_orfA; Borrelia ORF-A
    pfam04843
    Location:47192
    Herpes_teg_N; Herpesvirus tegument protein, N-terminal conserved region
    pfam14214
    Location:12591447
    Helitron_like_N; Helitron helicase-like domain at N-terminus
    cl00490
    Location:18231949
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily