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Gm46353 predicted gene, 46353 [ Mus musculus (house mouse) ]

Gene ID: 108168003, updated on 8-Feb-2024

Summary

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Official Symbol
Gm46353provided by MGI
Official Full Name
predicted gene, 46353provided by MGI
Primary source
MGI:MGI:5825990
See related
AllianceGenome:MGI:5825990
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in genital fat pad adult (RPKM 184.1), thymus adult (RPKM 170.9) and 23 other tissues See more
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Genomic context

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Location:
12 C2; 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (69597892..69601293)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (69550712..69554519)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 5830428M24 gene Neighboring gene STARR-positive B cell enhancer mm9_chr12:70576247-70576548 Neighboring gene predicted gene, 31512 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:70602988-70603097 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:70617614-70617767 Neighboring gene STARR-positive B cell enhancer ABC_E7141 Neighboring gene valosin containing protein lysine (K) methyltransferase Neighboring gene predicted gene, 24449 Neighboring gene SOS Ras/Rho guanine nucleotide exchange factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein Gm46353

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    69597892..69601293
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017315325.3 → XP_017170814.3  uncharacterized protein Gm46353

    Conserved Domains (2) summary
    pfam18697
    Location:195 → 276
    MLVIN_C; Murine leukemia virus (MLV) integrase (IN) C-terminal domain
    cl14782
    Location:109 → 163
    RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8
Nucleotide Protein Strain
Heading Accession and Version

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