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A830008E24Rik RIKEN cDNA A830008E24 gene [ Mus musculus (house mouse) ]

Gene ID: 108167736, updated on 21-May-2024

Summary

Official Symbol
A830008E24Rikprovided by MGI
Official Full Name
RIKEN cDNA A830008E24 geneprovided by MGI
Primary source
MGI:MGI:3041183
See related
Ensembl:ENSMUSG00000100627 AllianceGenome:MGI:3041183
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm28286
Expression
Biased expression in bladder adult (RPKM 1.7), mammary gland adult (RPKM 1.7) and 7 other tissues See more
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Genomic context

See A830008E24Rik in Genome Data Viewer
Location:
1 G3; 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (153902361..153993599, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (154026615..154117853, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1568 Neighboring gene microRNA 8114 Neighboring gene glutamate-ammonia ligase Neighboring gene predicted gene, 30327 Neighboring gene STARR-seq mESC enhancer starr_02710 Neighboring gene predicted gene, 46165 Neighboring gene STARR-seq mESC enhancer starr_02711 Neighboring gene predicted gene, 25336 Neighboring gene STARR-seq mESC enhancer starr_02712 Neighboring gene STARR-seq mESC enhancer starr_02713 Neighboring gene predicted gene, 30388 Neighboring gene zinc finger protein 648 Neighboring gene RIKEN cDNA 4930452N14 gene Neighboring gene RIKEN cDNA 4930532M18 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_168298.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC099702, AC114533
  2. NR_168299.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114533
  3. NR_168300.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114533
    Related
    ENSMUST00000246803.1
  4. NR_168301.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114533
    Related
    ENSMUST00000245448.1
  5. NR_190206.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114533
    Related
    ENSMUST00000246704.1
  6. NR_190207.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114533

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    153902361..153993599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)