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ACBD3-AS1 ACBD3 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 107985353, updated on 26-Oct-2024

Summary

Official Symbol
ACBD3-AS1provided by HGNC
Official Full Name
ACBD3 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40701
See related
AllianceGenome:HGNC:40701
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 5.3), esophagus (RPKM 5.1) and 25 other tissues See more
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Genomic context

See ACBD3-AS1 in Genome Data Viewer
Location:
1q42.12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (226148003..226154977)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (225335869..225342843)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (226335704..226342678)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8-like Neighboring gene uncharacterized LOC124904586 Neighboring gene acyl-CoA binding domain containing 3 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_5830 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:226369626-226370126 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:226370127-226370627 Neighboring gene Sharpr-MPRA regulatory region 9906 Neighboring gene uncharacterized LOC101927247 Neighboring gene ribosomal protein L34 pseudogene 7 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:226391149-226391650 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:226398175-226398896 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:226402654-226403619 Neighboring gene uncharacterized LOC124904528

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146443.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL592045

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    226148003..226154977
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    225335869..225342843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)