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LOC107984685 uncharacterized LOC107984685 [ Homo sapiens (human) ]

Gene ID: 107984685, updated on 22-Oct-2024

Summary

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Gene symbol
LOC107984685
Gene description
uncharacterized LOC107984685
See related
Ensembl:ENSG00000258038
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984685 in Genome Data Viewer
Location:
14q12
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (28971289..29187907)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (23169197..23385913)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2281 Neighboring gene Vac14, PIKFYVE complex component pseudogene Neighboring gene long intergenic non-protein coding RNA 2327 Neighboring gene NANOG hESC enhancer GRCh37_chr14:29345421-29345922 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:29445875-29447074 Neighboring gene long intergenic non-protein coding RNA 2326 Neighboring gene RNA, U6 small nuclear 864, pseudogene Neighboring gene Sharpr-MPRA regulatory region 1682 Neighboring gene uncharacterized LOC102724934 Neighboring gene VISTA enhancer hs566 Neighboring gene VISTA enhancer hs1539 Neighboring gene VISTA enhancer hs1168 Neighboring gene VISTA enhancers hs342 and hs1523 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:29923477-29924033 Neighboring gene VISTA enhancer hs598 Neighboring gene RNA, U11 small nuclear 5, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    28971289..29187907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007064101.1 RNA Sequence

  2. XR_001750697.1 RNA Sequence

  3. XR_001750694.2 RNA Sequence

  4. XR_001750699.2 RNA Sequence

  5. XR_001750700.2 RNA Sequence

  6. XR_001750696.1 RNA Sequence

  7. XR_007064099.1 RNA Sequence

    Related
    ENST00000660765.1

  8. XR_007064100.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    23169197..23385913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007084559.1 RNA Sequence

  2. XR_007084560.1 RNA Sequence

  3. XR_007084556.1 RNA Sequence

  4. XR_007084561.1 RNA Sequence

  5. XR_007084555.1 RNA Sequence

  6. XR_007084558.1 RNA Sequence

  7. XR_007084562.1 RNA Sequence

  8. XR_007084557.1 RNA Sequence

Nucleotide Protein
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