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LOC107957227 adenylate isopentenyltransferase-like [ Gossypium hirsutum (cotton) ]

Gene ID: 107957227, updated on 7-Dec-2023

Summary

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Gene symbol
LOC107957227
Gene description
adenylate isopentenyltransferase-like
Locus tag
ERO13_A05G321400v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: A05
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A05 NC_053428.1 (71190142..71191727, complement)
100 previous assembly ASM98774v1 (GCF_000987745.1) 10 NC_030083.1 (19107586..19109123, complement)

Chromosome A05 - NC_053428.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP dimethylallyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA dimethylallyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokinin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenylate isopentenyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium hirsutum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053428.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    71190142..71191727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016892684.2 → XP_016748173.1  adenylate isopentenyltransferase-like

    UniProtKB/TrEMBL
    A0A1U8JA48, A0A1U8PD03
    Conserved Domains (1) summary
    cl38936
    Location:1 → 347
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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