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LOC107954111 serine/threonine-protein kinase Nek5-like [ Gossypium hirsutum (cotton) ]

Gene ID: 107954111, updated on 7-Dec-2023

Summary

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Gene symbol
LOC107954111
Gene description
serine/threonine-protein kinase Nek5-like
Locus tag
ERO13_D07G116400v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: D07
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D07 NC_053443.1 (16540750..16547298, complement)
100 previous assembly ASM98774v1 (GCF_000987745.1) 9 NC_030082.1 (47881656..47888383)

Chromosome D07 - NC_053443.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107956639 Neighboring gene uncharacterized LOC107956638 Neighboring gene endo-1,4-beta-xylanase 5-like Neighboring gene apoptosis-inducing factor homolog A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cortical microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase Nek5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium hirsutum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053443.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    16540750..16547298 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016889583.2 → XP_016745072.2  serine/threonine-protein kinase Nek5-like

    UniProtKB/TrEMBL
    A0A1U8P1H6
    Conserved Domains (1) summary
    cd08215
    Location:7 → 262
    STKc_Nek; Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase
Nucleotide Protein
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