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LOC107922039 phosphatidylinositol-3-phosphatase myotubularin-1 [ Gossypium hirsutum (cotton) ]

Gene ID: 107922039, updated on 7-Dec-2023

Summary

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Gene symbol
LOC107922039
Gene description
phosphatidylinositol-3-phosphatase myotubularin-1
Locus tag
ERO13_D01G118800v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: D01
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D01 NC_053437.1 (26725794..26742356, complement)
100 previous assembly ASM98774v1 (GCF_000987745.1) 25 NC_030098.1 (32654108..32669805)

Chromosome D01 - NC_053437.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121213635 Neighboring gene SEC12-like protein 1 Neighboring gene 3-phosphoinositide-dependent protein kinase 2 Neighboring gene uncharacterized LOC107921647 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-3-phosphatase myotubularin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium hirsutum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053437.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    26725794..26742356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016851864.2 → XP_016707353.1  phosphatidylinositol-3-phosphatase myotubularin-1 isoform X1

    UniProtKB/TrEMBL
    A0A1U8KY84, A0A1U8L1X8
    Conserved Domains (2) summary
    pfam06602
    Location:216 → 586
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:73 → 159
    PH-like; Pleckstrin homology-like domain

  2. XM_016851865.2 → XP_016707354.1  phosphatidylinositol-3-phosphatase myotubularin-1 isoform X2

    UniProtKB/TrEMBL
    A0A1U8KY84, A0A1U8L2V5

  3. XM_016851866.2 → XP_016707355.1  phosphatidylinositol-3-phosphatase myotubularin-1 isoform X3

    UniProtKB/TrEMBL
    A0A1U8KY58, A0A1U8KY84

RNA

  1. XR_005909000.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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