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LOC107897771 caffeoylshikimate esterase-like [ Gossypium hirsutum (cotton) ]

Gene ID: 107897771, updated on 7-Dec-2023

Summary

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Gene symbol
LOC107897771
Gene description
caffeoylshikimate esterase-like
Locus tag
ERO13_A10G210500v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC107897771 in Genome Data Viewer
Location:
chromosome: A10
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A10 NC_053433.1 (112551337..112555263)
100 previous assembly ASM98774v1 (GCF_000987745.1) 16 NC_030089.1 (90007909..90011270)

Chromosome A10 - NC_053433.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L35 Neighboring gene caffeoylshikimate esterase Neighboring gene probable prefoldin subunit 2 Neighboring gene spliceosome-associated protein 130 A Neighboring gene dirigent protein 25-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caffeoylshikimate esterase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium hirsutum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053433.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    112551337..112555263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016823341.2 → XP_016678830.2  caffeoylshikimate esterase-like

    UniProtKB/TrEMBL
    A0A1U8IL15
    Conserved Domains (1) summary
    cl21494
    Location:6 → 299
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

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