U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107857984 probable indole-3-pyruvate monooxygenase YUCCA5 [ Capsicum annuum ]

Gene ID: 107857984, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107857984
Gene description
probable indole-3-pyruvate monooxygenase YUCCA5
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Also known as
Bs3; Bs3-E
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 2 NC_061112.1 (112427563..112429372)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 2 NC_029978.1 (119577029..119578588)

Chromosome 2 - NC_061112.1Genomic Context describing neighboring genes Neighboring gene transcription termination factor MTEF18, mitochondrial Neighboring gene probable RNA 3'-terminal phosphate cyclase-like protein Neighboring gene TLC domain-containing protein 4-B Neighboring gene probable aspartyl protease At4g16563

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: probable indole-3-pyruvate monooxygenase YUCCA5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061112.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    112427563..112429372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047406625.1 → XP_047262581.1  LOW QUALITY PROTEIN: probable indole-3-pyruvate monooxygenase YUCCA5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases