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LOC107851434 delta(12)-acyl-lipid-desaturase [ Capsicum annuum ]

Gene ID: 107851434, updated on 30-Nov-2023

Summary

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Gene symbol
LOC107851434
Gene description
delta(12)-acyl-lipid-desaturase
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsicum annuum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Genomic context

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See LOC107851434 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
101 current UCD10Xv1.1 (GCF_002878395.1) 12 NC_061122.1 (232666763..232668289, complement)
100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 12 NC_029988.1 (459944..461470)

Chromosome 12 - NC_061122.1Genomic Context describing neighboring genes Neighboring gene 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like Neighboring gene delta(12)-fatty-acid desaturase FAD2 Neighboring gene delta(12)-fatty-acid desaturase FAD2 Neighboring gene delta(12)-fatty-acid desaturase FAD2 Neighboring gene delta(12)-acyl-lipid-desaturase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta(12)-acyl-lipid-desaturase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCD10Xv1.1 Primary Assembly

Genomic

  1. NC_061122.1 Reference UCD10Xv1.1 Primary Assembly

    Range
    232666763..232668289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016696442.2 → XP_016551928.1  delta(12)-acyl-lipid-desaturase

    UniProtKB/TrEMBL
    A0A1U8EXK5
    Conserved Domains (1) summary
    PLN02505
    Location:1 → 382
    PLN02505; omega-6 fatty acid desaturase
Nucleotide Protein
Heading Accession and Version

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