U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107630065 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a [ Arachis ipaensis ]

Gene ID: 107630065, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107630065
Gene description
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107630065 in Genome Data Viewer
Location:
chromosome: B03
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B03 NC_029787.2 (29435735..29438008, complement)
100 previous assembly Araip1.0 (GCF_000816755.1) B03 NC_029787.1 (26345094..26347345)

Chromosome B03 - NC_029787.2Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At4g01130-like Neighboring gene exosome complex component RRP41 homolog Neighboring gene mitochondrial carrier protein MTM1-like Neighboring gene tubulin gamma-1 chain

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of tRNA (m1A) methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029787.2 Reference Araip1.1

    Range
    29435735..29438008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016333091.2 → XP_016188577.1  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a

    Conserved Domains (1) summary
    cl17173
    Location:69 → 306
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases