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LOC107625719 sulfoquinovosyl transferase SQD2 [ Arachis ipaensis ]

Gene ID: 107625719, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107625719
Gene description
sulfoquinovosyl transferase SQD2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis ipaensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: B02
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Araip1.1 (GCF_000816755.2) B02 NC_029786.2 (91858251..91862685, complement)
100 previous assembly Araip1.0 (GCF_000816755.1) B02 NC_029786.1 (91521651..91526085, complement)

Chromosome B02 - NC_029786.2Genomic Context describing neighboring genes Neighboring gene BAHD acyltransferase DCR Neighboring gene uncharacterized LOC107627646 Neighboring gene protein lingerer-like Neighboring gene uncharacterized LOC107625721

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Araip1.1

Genomic

  1. NC_029786.2 Reference Araip1.1

    Range
    91858251..91862685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016328420.1 → XP_016183906.1  sulfoquinovosyl transferase SQD2

Nucleotide Protein
Heading Accession and Version

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