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p4ha3 prolyl 4-hydroxylase, alpha polypeptide III [ Sinocyclocheilus grahami ]

Gene ID: 107561385, updated on 14-Mar-2024

Summary

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Gene symbol
p4ha3
Gene description
prolyl 4-hydroxylase, alpha polypeptide III
See related
Ensembl:ENSSGRG00000016823
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505948.1 (596551..604619, complement)

NW_015505948.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107561384 Neighboring gene serine--tRNA ligase, mitochondrial-like Neighboring gene odorant receptor, family 95, subfamily A, member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505948.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 4-hydroxylase subunit alpha-3
Names
prolyl 4-hydroxylase subunit alpha 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505948.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    596551..604619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016245830.1 → XP_016101316.1  prolyl 4-hydroxylase subunit alpha-3 isoform X3

    UniProtKB/TrEMBL
    A0A672LZM2
    Related
    ENSSGRP00000029638.1, ENSSGRT00000031850.1

  2. XM_016245827.1 → XP_016101313.1  prolyl 4-hydroxylase subunit alpha-3 isoform X1

    UniProtKB/TrEMBL
    A0A672LZL4, A0A672M3I7
    Related
    ENSSGRP00000029650.1, ENSSGRT00000031862.1

  3. XM_016245829.1 → XP_016101315.1  prolyl 4-hydroxylase subunit alpha-3 isoform X2

    UniProtKB/TrEMBL
    A0A672M3I7
Nucleotide Protein
Heading Accession and Version

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