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LOC107493231 glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic [ Arachis duranensis ]

Gene ID: 107493231, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107493231
Gene description
glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 6 NC_029777.3 (17874139..17876201)
101 previous assembly Aradu1.1 (GCF_000817695.2) A06 NC_029777.2 (17924249..17926544)

Chromosome 6 - NC_029777.3Genomic Context describing neighboring genes Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 2-like Neighboring gene uncharacterized LOC107493191 Neighboring gene calcium-dependent protein kinase 29 Neighboring gene uncharacterized LOC107493190

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut. Nagy ED, et al. BMC Genomics, 2012 Sep 11. PMID 22967170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate-1-semialdehyde 2,1-aminomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tetrapyrrole biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029777.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    17874139..17876201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016114324.3 → XP_015969810.1  glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic

    UniProtKB/TrEMBL
    A0A6P4DNR4
    Conserved Domains (1) summary
    cl18945
    Location:1 → 474
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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