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LOC107486631 exocyst complex component EXO70E2 [ Arachis duranensis ]

Gene ID: 107486631, updated on 23-Nov-2023

Summary

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Gene symbol
LOC107486631
Gene description
exocyst complex component EXO70E2
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 4 NC_029775.3 (117263327..117266256, complement)
101 previous assembly Aradu1.1 (GCF_000817695.2) A04 NC_029775.2 (118850246..118853227, complement)

Chromosome 4 - NC_029775.3Genomic Context describing neighboring genes Neighboring gene protein RIK Neighboring gene glycine-rich RNA-binding protein 4, mitochondrial Neighboring gene serine carboxypeptidase-like 25 Neighboring gene probable endo-1,3(4)-beta-glucanase ARB_01444

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exocyst complex component EXO70E2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029775.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    117263327..117266256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016107187.3 → XP_015962673.1  exocyst complex component EXO70E2

    UniProtKB/TrEMBL
    A0A6P4D7Q9
    Conserved Domains (1) summary
    pfam03081
    Location:289 → 656
    Exo70; Exo70 exocyst complex subunit
Nucleotide Protein
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