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LOC107424947 calcium-transporting ATPase 2, plasma membrane-type [ Ziziphus jujuba (common jujube) ]

Gene ID: 107424947, updated on 3-Apr-2024

Summary

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Gene symbol
LOC107424947
Gene description
calcium-transporting ATPase 2, plasma membrane-type
Locus tag
FEM48_ZijujUnG0035500
Gene type
protein coding
RefSeq status
MODEL
Organism
Ziziphus jujuba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
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Genomic context

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Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current ASM3175591v1 (GCF_031755915.1) 7 NC_083385.1 (13854225..13861116, complement)
101 previous assembly ZizJuj_1.1 (GCF_000826755.1) 8 NC_029686.1 (10261486..10274294, complement)

Chromosome 7 - NC_083385.1Genomic Context describing neighboring genes Neighboring gene cyclin-D5-1 Neighboring gene uncharacterized LOC107424913 Neighboring gene calcium-transporting ATPase 2, plasma membrane-type Neighboring gene calcium-transporting ATPase 2, plasma membrane-type

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-transporting ATPase 2, plasma membrane-type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031755915.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3175591v1 Primary Assembly

Genomic

  1. NC_083385.1 Reference ASM3175591v1 Primary Assembly

    Range
    13854225..13861116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048466401.2 → XP_048322358.1  calcium-transporting ATPase 2, plasma membrane-type

    UniProtKB/TrEMBL
    A0A6P4A4U5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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