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abcc9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107387088, updated on 3-Apr-2024

Summary

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Gene symbol
abcc9
Gene description
ATP-binding cassette, sub-family C (CFTR/MRP), member 9
See related
Ensembl:ENSNFUG00015024329
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
46
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539916.1 (87339071..87480105)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr01 NC_029649.1 (90694965..90833238)

NW_026539916.1Genomic Context describing neighboring genes Neighboring gene plexin-B2 Neighboring gene zinc finger protein 568 Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene enoyl CoA hydratase domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfonylurea receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family C member 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539916.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    87339071..87480105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054739819.1 → XP_054595794.1  ATP-binding cassette sub-family C member 9 isoform X3

  2. XM_054739820.1 → XP_054595795.1  ATP-binding cassette sub-family C member 9 isoform X4

  3. XM_054739823.1 → XP_054595798.1  ATP-binding cassette sub-family C member 9 isoform X7

  4. XM_054739827.1 → XP_054595802.1  ATP-binding cassette sub-family C member 9 isoform X11

  5. XM_054739817.1 → XP_054595792.1  ATP-binding cassette sub-family C member 9 isoform X1

  6. XM_054739818.1 → XP_054595793.1  ATP-binding cassette sub-family C member 9 isoform X2

  7. XM_054739821.1 → XP_054595796.1  ATP-binding cassette sub-family C member 9 isoform X5

  8. XM_054739826.1 → XP_054595801.1  ATP-binding cassette sub-family C member 9 isoform X10

  9. XM_054739822.1 → XP_054595797.1  ATP-binding cassette sub-family C member 9 isoform X6

  10. XM_054739824.1 → XP_054595799.1  ATP-binding cassette sub-family C member 9 isoform X8

    UniProtKB/TrEMBL
    A0A8C6W008

  11. XM_054739825.1 → XP_054595800.1  ATP-binding cassette sub-family C member 9 isoform X9

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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